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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918056.1_cds_XP_016467583.1_60316
CDS Infomation

[gene=LOC107790195] [db_xref=GeneID:107790195] [protein=serine/threonine protein phosphatase 2A regulatory subunit B''beta-like] [exception=annotated by transcript or proteomic data] [protein_id=XP_016467583.1] [location=complement(join(102921..103061,103164..103289,103953..104109,105075..105184,105384..105531,106042..106183,106910..107000,107207..107312,107914..108013,<110463..110506,110622..110864,112171..112317))] [gbkey=CDS]
Sequence

ATGGATGTTGATTTAGTTGTTGATATAGCGAGTCTCGATGCCGAATTATTGCAGCTTCCT
GAATTTTCACCTTTGGCTATCAAAGATAATCCGTATGCTCGGAGGCTTTTTGATCAATGG
CTTTCGCTCCCCATCACGACTTCTAAGGTGAAATCTTTGCTTGATAATGCTAAGGCTGGT
GGTCCCTTGAATCTGACTGGAACTTCTTCTAGCACAAATGTTGCTTCAAGCAGTTCTTTG
CCGTCTATGTTTCCAGCTGGAAGTACCCCTCCACTTTCACCGAGAAGCTCATCTGGTTCA
CCGCGAACAACAAGACATAGGGCAGGCCCCTCTATATTAGGTTCTCCTCTGAAATTAGTG
AACGAGCCTGTTAAAGAGCAAATACCACAGCAGTTTTATTTTCAAAATGGCCGTCCACCT
CCGAATGAATTGAAAATTTAAACCAATTACTAAGGAAATATGCAAGTTGCCGTCGTTCTT
CTCAAGGGCTCTTTTTAGGAAGATTGATGTTGATGGAACGGGCATTATAACAAGGGATGC
CTTTGTTGATTATTGGATCAACGGAAACATGTTGACAAAAGATATAGCAACCCAGATTTA
CACAATCTTGAAGCAGCCAGATCTCAAACACCTGACGCAGGATGATTTCAAGCCTGTTCT
TCAAGAGCTTTTGGCAACACATCCCGGGTTAGAGTTCTTACGGAGCACGCCTGAATTTCA
AGAGCGATATGCTGAAACTGTAATATACAGAATATTTTTCTACGTGAATAGATTGGGTAA
TGGTCAACTTACCCTCAGGGAGCTGAAGCGTTCAGACCTAATTGCTGCAATGCAACATGC
AGATGAAGAAGAAGATATTAACAAGGTCCTTAGGTATTTCTCTTACGAACACTTTTACGT
GATATATTGCAAGTTTTGGGAGCTCGATACGGATCATGATTTTCTGATTGATAAAGAGAA
CCTCATTCGATATGGCAACCATGCCCTTACATACAGGATTGTTGATAGAATATTTTCTCA
GGTTCCAAGGAAGTTTACAAGTAAAGTTGAAGGAAAGATGGGTTATGAAGACTTTGTTTA
CTTTATATTGTCGGAGGAGGATAAAACGTCAGAGCCTGGTCTTGAATACTGGTTCAAATG
CATAGATTTGGATGGGAATGGTGTTCTGACTAGGAATGAAATGCAATTTTTTTATGAGGA
GCAGTTGCATAGAATGGAATGCATGGGCCAAGAGCCAGTGCTTTTTGAGGATATATTGTG
CCAGATGGTTGACATGATTAGTCCAGAGGATGAAAGTTATTTTATGTTACATGACTTGAA
GGGCAATAAATTATCCGGCAGTGTTTTCAATATACTCCTTAACCTCAATAAGTTCATGGC
ATTTGAAACTCGCGACCCATTCCTAATACGTCAGGAGCGCGAGAACCCGAATTTGACTGA
GTGGGATCGCTTTGCACACAGGGAATATATTAGACTCTCAATGGAGGAAGATGCAGAGGA
CGCCTCCAATGGAAGTGCAGATGTCTGGGATGAATCACTTGAGGCTCCTTTTTGA

Peptide Sequence

PEP ID

XP_016467583.1
PEP Infomation

PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta-like [Nicotiana tabacum]
Sequence

MDVDLVVDIASLDAELLQLPEFSPLAIKDNPYARRLFDQWLSLPITTSKVKSLLDNAKAG
GPLNLTGTSSSTNVASSSSLPSMFPAGSTPPLSPRSSSGSPRTTRHRAGPSILGSPLKLV
NEPVKEQIPQQFYFQNGRPPPNELKERCLFRINQFFYGHMDGLQMHEFKPITKEICKLPS
FFSRALFRKIDVDGTGIITRDAFVDYWINGNMLTKDIATQIYTILKQPDLKHLTQDDFKP
VLQELLATHPGLEFLRSTPEFQERYAETVIYRIFFYVNRLGNGQLTLRELKRSDLIAAMQ
HADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRIF
SQVPRKFTSKVEGKMGYEDFVYFILSEEDKTSEPGLEYWFKCIDLDGNGVLTRNEMQFFY
EEQLHRMECMGQEPVLFEDILCQMVDMISPEDESYFMLHDLKGNKLSGSVFNILLNLNKF
MAFETRDPFLIRQERENPNLTEWDRFAHREYIRLSMEEDAEDASNGSADVWDESLEAPF

Transcript Sequence

Gene sequence data has not been registered.